annotate src/rlm/openmind.clj @ 0:78a630e650d2

initial import
author Robert McIntyre <rlm@mit.edu>
date Tue, 18 Oct 2011 00:57:08 -0700
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rlm@0 1 (ns rlm.openmind
rlm@0 2 (:refer-clojure :only [])
rlm@0 3 (:require rlm.ns-rlm rlm.light-base))
rlm@0 4 (rlm.ns-rlm/ns-clone rlm.light-base)
rlm@0 5
rlm@0 6
rlm@0 7 (use 'clojure.contrib.sql)
rlm@0 8 (import 'org.gjt.mm.mysql.Driver)
rlm@0 9 (use 'clojure.contrib.sql)
rlm@0 10 (undef distinct case compile drop take sort)
rlm@0 11 (use 'clojureql.core)
rlm@0 12 (import 'java.io.File)
rlm@0 13 (use '[clojure.java.io :only [copy]])
rlm@0 14 (use '[clojure.contrib.shell-out :only [sh]])
rlm@0 15 (use '[clojure.string :only [split]])
rlm@0 16 (use '[coderloop [utils :only [md5]]])
rlm@0 17 (import 'java.sql.Date)
rlm@0 18
rlm@0 19
rlm@0 20
rlm@0 21 (def *port* 3306)
rlm@0 22
rlm@0 23 (def *host* "localhost")
rlm@0 24
rlm@0 25 (def *db-host* "localhost")
rlm@0 26
rlm@0 27 (def *db-name* "omics")
rlm@0 28
rlm@0 29 (def *db* {:classname "com.mysql.jdbc.Driver"
rlm@0 30 :subprotocol "mysql"
rlm@0 31 :subname (str "//" *db-host* ":" *port* "/" *db-name*)
rlm@0 32 :user "root"
rlm@0 33 :password "sql1005025"})