#+title: Simulated Sense of Sight

 #+author: Robert McIntyre

 #+email: rlm@mit.edu

 #+description: Simulated sight for AI research using JMonkeyEngine3 and clojure

 #+keywords: computer vision, jMonkeyEngine3, clojure

 #+SETUPFILE: ../../aurellem/org/setup.org

 #+INCLUDE: ../../aurellem/org/level-0.org

 #+babel: :mkdirp yes :noweb yes :exports both

 

 * JMonkeyEngine natively supports multiple views of the same world.

  

 Vision is one of the most important senses for humans, so I need to

 build a simulated sense of vision for my AI. I will do this with

 simulated eyes. Each eye can be independently moved and should see its

 own version of the world depending on where it is.

 

 Making these simulated eyes a reality is simple because jMonkeyEngine

 already contains extensive support for multiple views of the same 3D

 simulated world. The reason jMonkeyEngine has this support is because

 the support is necessary to create games with split-screen

 views. Multiple views are also used to create efficient

 pseudo-reflections by rendering the scene from a certain perspective

 and then projecting it back onto a surface in the 3D world.

 

 #+caption: jMonkeyEngine supports multiple views to enable split-screen games, like GoldenEye, which was one of the first games to use split-screen views.

 [[../images/goldeneye-4-player.png]]

 

 ** =ViewPorts=, =SceneProcessors=, and the =RenderManager=. 

 # =ViewPorts= are cameras; =RenderManger= takes snapshots each frame. 

 #* A Brief Description of jMonkeyEngine's Rendering Pipeline

 

 jMonkeyEngine allows you to create a =ViewPort=, which represents a

 view of the simulated world. You can create as many of these as you

 want. Every frame, the =RenderManager= iterates through each

 =ViewPort=, rendering the scene in the GPU. For each =ViewPort= there

 is a =FrameBuffer= which represents the rendered image in the GPU.

 

 #+caption: =ViewPorts= are cameras in the world. During each frame, the =RenderManager= records a snapshot of what each view is currently seeing; these snapshots are =FrameBuffer= objects.

 #+ATTR_HTML: width="400"

 [[../images/diagram_rendermanager2.png]]

 

 Each =ViewPort= can have any number of attached =SceneProcessor=

 objects, which are called every time a new frame is rendered. A

 =SceneProcessor= receives its =ViewPort's= =FrameBuffer= and can do

 whatever it wants to the data.  Often this consists of invoking GPU

 specific operations on the rendered image.  The =SceneProcessor= can

 also copy the GPU image data to RAM and process it with the CPU.

 

 ** From Views to Vision

 # Appropriating Views for Vision.

 

 Each eye in the simulated creature needs its own =ViewPort= so that

 it can see the world from its own perspective. To this =ViewPort=, I

 add a =SceneProcessor= that feeds the visual data to any arbitrary

 continuation function for further processing.  That continuation

 function may perform both CPU and GPU operations on the data. To make

 this easy for the continuation function, the =SceneProcessor=

 maintains appropriately sized buffers in RAM to hold the data.  It does

 not do any copying from the GPU to the CPU itself because it is a slow

 operation.

 

 #+name: pipeline-1

 #+begin_src clojure

 (defn vision-pipeline

   "Create a SceneProcessor object which wraps a vision processing

   continuation function. The continuation is a function that takes 

   [#^Renderer r #^FrameBuffer fb #^ByteBuffer b #^BufferedImage bi],

   each of which has already been appropriately sized."

   [continuation]

   (let [byte-buffer (atom nil)

 	renderer (atom nil)

         image (atom nil)]

   (proxy [SceneProcessor] []

     (initialize

      [renderManager viewPort]

      (let [cam (.getCamera viewPort)

 	   width (.getWidth cam)

 	   height (.getHeight cam)]

        (reset! renderer (.getRenderer renderManager))

        (reset! byte-buffer

 	     (BufferUtils/createByteBuffer

 	      (* width height 4)))

         (reset! image (BufferedImage.

                       width height

                       BufferedImage/TYPE_4BYTE_ABGR))))

     (isInitialized [] (not (nil? @byte-buffer)))

     (reshape [_ _ _])

     (preFrame [_])

     (postQueue [_])

     (postFrame

      [#^FrameBuffer fb]

      (.clear @byte-buffer)

      (continuation @renderer fb @byte-buffer @image))

     (cleanup []))))

 #+end_src

 

 The continuation function given to =vision-pipeline= above will be

 given a =Renderer= and three containers for image data. The

 =FrameBuffer= references the GPU image data, but the pixel data can

 not be used directly on the CPU.  The =ByteBuffer= and =BufferedImage=

 are initially "empty" but are sized to hold the data in the

 =FrameBuffer=. I call transferring the GPU image data to the CPU

 structures "mixing" the image data. I have provided three functions to

 do this mixing.

 

 #+name: pipeline-2

 #+begin_src clojure

 (defn frameBuffer->byteBuffer!

   "Transfer the data in the graphics card (Renderer, FrameBuffer) to

    the CPU (ByteBuffer)."  

   [#^Renderer r #^FrameBuffer fb #^ByteBuffer bb]

   (.readFrameBuffer r fb bb) bb)

 

 (defn byteBuffer->bufferedImage!

   "Convert the C-style BGRA image data in the ByteBuffer bb to the AWT

    style ABGR image data and place it in BufferedImage bi."

   [#^ByteBuffer bb #^BufferedImage bi]

   (Screenshots/convertScreenShot bb bi) bi)

 

 (defn BufferedImage!

   "Continuation which will grab the buffered image from the materials

    provided by (vision-pipeline)."

   [#^Renderer r #^FrameBuffer fb #^ByteBuffer bb #^BufferedImage bi]

   (byteBuffer->bufferedImage!

    (frameBuffer->byteBuffer! r fb bb) bi))

 #+end_src

 

 Note that it is possible to write vision processing algorithms

 entirely in terms of =BufferedImage= inputs. Just compose that

 =BufferedImage= algorithm with =BufferedImage!=. However, a vision

 processing algorithm that is entirely hosted on the GPU does not have

 to pay for this convenience.

 

 * Optical sensor arrays are described with images and referenced with metadata

 The vision pipeline described above handles the flow of rendered

 images. Now, we need simulated eyes to serve as the source of these

 images. 

 

 An eye is described in blender in the same way as a joint. They are

 zero dimensional empty objects with no geometry whose local coordinate

 system determines the orientation of the resulting eye. All eyes are

 children of a parent node named "eyes" just as all joints have a

 parent named "joints". An eye binds to the nearest physical object

 with =bind-sense=.

 

 #+name: add-eye

 #+begin_src clojure

 (in-ns 'cortex.vision)

 

 (defn add-eye!

   "Create a Camera centered on the current position of 'eye which

    follows the closest physical node in 'creature. The camera will

    point in the X direction and use the Z vector as up as determined

    by the rotation of these vectors in blender coordinate space. Use

    XZY rotation for the node in blender."

   [#^Node creature #^Spatial eye]

   (let [target (closest-node creature eye)

         [cam-width cam-height] 

         ;;[640 480] ;; graphics card on laptop doesn't support

                     ;; arbitray dimensions.

         (eye-dimensions eye)

         cam (Camera. cam-width cam-height)

         rot (.getWorldRotation eye)]

     (.setLocation cam (.getWorldTranslation eye))

     (.lookAtDirection

      cam                           ; this part is not a mistake and

      (.mult rot Vector3f/UNIT_X)   ; is consistent with using Z in

      (.mult rot Vector3f/UNIT_Y))  ; blender as the UP vector.

     (.setFrustumPerspective

      cam (float 45)

      (float (/ (.getWidth cam) (.getHeight cam)))

      (float 1)

      (float 1000))

     (bind-sense target cam) cam))

 #+end_src

 

 #+results: add-eye

 : #'cortex.vision/add-eye!

 

 Here, the camera is created based on metadata on the eye-node and

 attached to the nearest physical object with =bind-sense=

 ** The Retina

 

 An eye is a surface (the retina) which contains many discrete sensors

 to detect light. These sensors have can have different light-sensing

 properties.  In humans, each discrete sensor is sensitive to red,

 blue, green, or gray. These different types of sensors can have

 different spatial distributions along the retina. In humans, there is

 a fovea in the center of the retina which has a very high density of

 color sensors, and a blind spot which has no sensors at all. Sensor

 density decreases in proportion to distance from the fovea.

 

 I want to be able to model any retinal configuration, so my eye-nodes

 in blender contain metadata pointing to images that describe the

 precise position of the individual sensors using white pixels. The

 meta-data also describes the precise sensitivity to light that the

 sensors described in the image have.  An eye can contain any number of

 these images. For example, the metadata for an eye might look like

 this:

 

 #+begin_src clojure

 {0xFF0000 "Models/test-creature/retina-small.png"}

 #+end_src

 

 #+caption: The retinal profile image "Models/test-creature/retina-small.png". White pixels are photo-sensitive elements. The distribution of white pixels is denser in the middle and falls off at the edges and is inspired by the human retina.

 [[../assets/Models/test-creature/retina-small.png]]

 

 Together, the number 0xFF0000 and the image image above describe the

 placement of red-sensitive sensory elements.

 

 Meta-data to very crudely approximate a human eye might be something

 like this:

 

 #+begin_src clojure

 (let [retinal-profile "Models/test-creature/retina-small.png"]

   {0xFF0000 retinal-profile

    0x00FF00 retinal-profile

    0x0000FF retinal-profile

    0xFFFFFF retinal-profile})

 #+end_src

 

 The numbers that serve as keys in the map determine a sensor's

 relative sensitivity to the channels red, green, and blue. These

 sensitivity values are packed into an integer in the order =|_|R|G|B|=

 in 8-bit fields. The RGB values of a pixel in the image are added

 together with these sensitivities as linear weights. Therefore,

 0xFF0000 means sensitive to red only while 0xFFFFFF means sensitive to

 all colors equally (gray).

 

 For convenience I've defined a few symbols for the more common

 sensitivity values.

 

 #+name: sensitivity

 #+begin_src clojure

 (def sensitivity-presets

   "Retinal sensitivity presets for sensors that extract one channel

    (:red :blue :green) or average all channels (:all)"

   {:all    0xFFFFFF

    :red    0xFF0000

    :blue   0x0000FF

    :green  0x00FF00})

 #+end_src

 

 ** Metadata Processing

 

 =retina-sensor-profile= extracts a map from the eye-node in the same

 format as the example maps above.  =eye-dimensions= finds the

 dimensions of the smallest image required to contain all the retinal

 sensor maps.

 

 #+name: retina

 #+begin_src clojure

 (defn retina-sensor-profile

   "Return a map of pixel sensitivity numbers to BufferedImages

    describing the distribution of light-sensitive components of this

    eye. :red, :green, :blue, :gray are already defined as extracting

    the red, green, blue, and average components respectively."

    [#^Spatial eye]

    (if-let [eye-map (meta-data eye "eye")]

      (map-vals

       load-image

       (eval (read-string eye-map)))))

 

 (defn eye-dimensions 

   "Returns [width, height] determined by the metadata of the eye."

   [#^Spatial eye]

   (let [dimensions

           (map #(vector (.getWidth %) (.getHeight %))

                (vals (retina-sensor-profile eye)))]

     [(apply max (map first dimensions))

      (apply max (map second dimensions))]))

 #+end_src

 

 * Importing and parsing descriptions of eyes.

 First off, get the children of the "eyes" empty node to find all the

 eyes the creature has.

 #+name: eye-node

 #+begin_src clojure

 (def

   ^{:doc "Return the children of the creature's \"eyes\" node."

     :arglists '([creature])}

   eyes

   (sense-nodes "eyes"))

 #+end_src

 

 Then, add the camera created by =add-eye!= to the simulation by

 creating a new viewport.

 

 #+name: add-camera

 #+begin_src clojure

 (in-ns 'cortex.vision)

 (defn add-camera!

   "Add a camera to the world, calling continuation on every frame

   produced." 

   [#^Application world camera continuation]

   (let [width (.getWidth camera)

 	height (.getHeight camera)

 	render-manager (.getRenderManager world)

 	viewport (.createMainView render-manager "eye-view" camera)]

     (doto viewport

       (.setClearFlags true true true)

       (.setBackgroundColor ColorRGBA/Black)

       (.addProcessor (vision-pipeline continuation))

       (.attachScene (.getRootNode world)))))

 #+end_src

 

 #+results: add-camera

 : #'cortex.vision/add-camera!

 

 

 The eye's continuation function should register the viewport with the

 simulation the first time it is called, use the CPU to extract the

 appropriate pixels from the rendered image and weight them by each

 sensor's sensitivity. I have the option to do this processing in

 native code for a slight gain in speed. I could also do it in the GPU

 for a massive gain in speed. =vision-kernel= generates a list of

 such continuation functions, one for each channel of the eye.

 

 #+name: kernel

 #+begin_src clojure 

 (in-ns 'cortex.vision)

 

 (defrecord attached-viewport [vision-fn viewport-fn]

   clojure.lang.IFn

   (invoke [this world] (vision-fn world))

   (applyTo [this args] (apply vision-fn args)))

 

 (defn pixel-sense [sensitivity pixel]

   (let [s-r (bit-shift-right (bit-and 0xFF0000 sensitivity) 16)

         s-g (bit-shift-right (bit-and 0x00FF00 sensitivity)  8)

         s-b (bit-and 0x0000FF sensitivity)

 

         p-r (bit-shift-right (bit-and 0xFF0000 pixel)       16)

         p-g (bit-shift-right (bit-and 0x00FF00 pixel)        8)

         p-b (bit-and 0x0000FF pixel)

 

         total-sensitivity (* 255 (+ s-r s-g s-b))]

         (float (/ (+ (* s-r p-r)

                      (* s-g p-g)

                      (* s-b p-b))

                   total-sensitivity))))

 

 (defn vision-kernel

   "Returns a list of functions, each of which will return a color

    channel's worth of visual information when called inside a running

    simulation."

   [#^Node creature #^Spatial eye & {skip :skip :or {skip 0}}]

   (let [retinal-map (retina-sensor-profile eye)

         camera (add-eye! creature eye)

         vision-image

         (atom

          (BufferedImage. (.getWidth camera)

                          (.getHeight camera)

                          BufferedImage/TYPE_BYTE_BINARY))

         register-eye!

         (runonce

          (fn [world]

            (add-camera!

             world camera

             (let [counter  (atom 0)]

               (fn [r fb bb bi]

                 (if (zero? (rem (swap! counter inc) (inc skip)))

                   (reset! vision-image

                           (BufferedImage! r fb bb bi))))))))]

      (vec

       (map

        (fn [[key image]]

          (let [whites (white-coordinates image)

                topology (vec (collapse whites))

                sensitivity (sensitivity-presets key key)]

            (attached-viewport.

             (fn [world]

               (register-eye! world)

               (vector

                topology

                (vec 

                 (for [[x y] whites]

                   (pixel-sense 

                    sensitivity

                    (.getRGB @vision-image x y))))))

             register-eye!)))

          retinal-map))))

 

 (defn gen-fix-display

   "Create a function to call to restore a simulation's display when it

    is disrupted by a Viewport."

   []

   (runonce

    (fn [world]

      (add-camera! world (.getCamera world) no-op))))

 #+end_src

 

 Note that since each of the functions generated by =vision-kernel=

 shares the same =register-eye!= function, the eye will be registered

 only once the first time any of the functions from the list returned

 by =vision-kernel= is called.  Each of the functions returned by

 =vision-kernel= also allows access to the =Viewport= through which

 it receives images.

 

 The in-game display can be disrupted by all the ViewPorts that the

 functions generated by =vision-kernel= add. This doesn't affect the

 simulation or the simulated senses, but can be annoying.

 =gen-fix-display= restores the in-simulation display.

 

 ** The =vision!= function creates sensory probes.

 

 All the hard work has been done; all that remains is to apply

 =vision-kernel= to each eye in the creature and gather the results

 into one list of functions.

 

 #+name: main

 #+begin_src clojure

 (defn vision!

   "Returns a list of functions, each of which returns visual sensory

    data when called inside a running simulation."

   [#^Node creature & {skip :skip :or {skip 0}}]

   (reduce

    concat 

    (for [eye (eyes creature)]

      (vision-kernel creature eye))))

 #+end_src

 

 ** Displaying visual data for debugging.

 # Visualization of Vision. Maybe less alliteration would be better.

 It's vital to have a visual representation for each sense. Here I use

 =view-sense= to construct a function that will create a display for

 visual data.

 

 #+name: display

 #+begin_src clojure 

 (in-ns 'cortex.vision)

 

 (defn view-vision

   "Creates a function which accepts a list of visual sensor-data and

   displays each element of the list to the screen." 

   []

   (view-sense

    (fn 

      [[coords sensor-data]]

      (let [image (points->image coords)]

        (dorun

         (for [i (range (count coords))]

           (.setRGB image ((coords i) 0) ((coords i) 1)

                    (gray (int (* 255 (sensor-data i)))))))

        image))))

 #+end_src

 

 * Demonstrations

 ** Demonstrating the vision pipeline.

 

 This is a basic test for the vision system.  It only tests the

 vision-pipeline and does not deal with loading eyes from a blender

 file. The code creates two videos of the same rotating cube from

 different angles. 

 

 #+name: test-1

 #+begin_src clojure

 (in-ns 'cortex.test.vision)

 

 (defn test-pipeline

   "Testing vision:

    Tests the vision system by creating two views of the same rotating

    object from different angles and displaying both of those views in

    JFrames.

 

    You should see a rotating cube, and two windows,

    each displaying a different view of the cube."

   ([] (test-pipeline false))

   ([record?]

      (let [candy

            (box 1 1 1 :physical? false :color ColorRGBA/Blue)]

        (world

         (doto (Node.)

           (.attachChild candy))

         {}

         (fn [world]

           (let [cam (.clone (.getCamera world))

                 width (.getWidth cam)

                 height (.getHeight cam)]

             (add-camera! world cam 

                          (comp

                           (view-image

                            (if record?

                              (File. "/home/r/proj/cortex/render/vision/1")))

                           BufferedImage!))

             (add-camera! world

                          (doto (.clone cam)

                            (.setLocation (Vector3f. -10 0 0))

                            (.lookAt Vector3f/ZERO Vector3f/UNIT_Y))

                          (comp

                           (view-image

                            (if record?

                              (File. "/home/r/proj/cortex/render/vision/2")))

                           BufferedImage!))

             (let [timer (IsoTimer. 60)]

               (.setTimer world timer)

               (display-dilated-time world timer))

             ;; This is here to restore the main view

             ;; after the other views have completed processing

             (add-camera! world (.getCamera world) no-op)))

         (fn [world tpf]

           (.rotate candy (* tpf 0.2) 0 0))))))

 #+end_src

 

 #+results: test-1

 : #'cortex.test.vision/test-pipeline

 

 #+begin_html

 <div class="figure">

 <video controls="controls" width="755">

   <source src="../video/spinning-cube.ogg" type="video/ogg"

 	  preload="none" poster="../images/aurellem-1280x480.png" />

 </video>

  <br> <a href="http://youtu.be/r5Bn2aG7MO0"> YouTube </a>

 <p>A rotating cube viewed from two different perspectives.</p>

 </div>

 #+end_html

 

 Creating multiple eyes like this can be used for stereoscopic vision

 simulation in a single creature or for simulating multiple creatures,

 each with their own sense of vision.

 ** Demonstrating eye import and parsing.

 

 To the worm from the last post, I add a new node that describes its

 eyes.

 

 #+attr_html: width=755

 #+caption: The worm with newly added empty nodes describing a single eye.

 [[../images/worm-with-eye.png]]

 

 The node highlighted in yellow is the root level "eyes" node.  It has

 a single child, highlighted in orange, which describes a single

 eye. This is the "eye" node. It is placed so that the worm will have

 an eye located in the center of the flat portion of its lower

 hemispherical section.

 

 The two nodes which are not highlighted describe the single joint of

 the worm.

 

 The metadata of the eye-node is:

 

 #+begin_src clojure :results verbatim :exports both

 (cortex.sense/meta-data

  (.getChild (.getChild (cortex.test.body/worm) "eyes") "eye") "eye")

 #+end_src

 

 #+results:

 : "(let [retina \"Models/test-creature/retina-small.png\"]

 :     {:all retina :red retina :green retina :blue retina})"

 

 This is the approximation to the human eye described earlier.

 

 #+name: test-2

 #+begin_src clojure

 (in-ns 'cortex.test.vision)

 

 (defn change-color [obj color]

   ;;(println-repl obj)

   (if obj

     (.setColor  (.getMaterial obj) "Color" color)))

 

 (defn colored-cannon-ball [color]

   (comp #(change-color % color)

          (fire-cannon-ball)))

 

 (defn gen-worm

   "create a creature acceptable for testing as a replacement for the

    worm."

   []

   (nodify

    "worm"

    [(nodify

      "eyes"

      [(doto

           (Node. "eye1")

         (.setLocalTranslation (Vector3f. 0 -1.1 0))

         (.setUserData

          

          "eye" 

          "(let [retina

                 \"Models/test-creature/retina-small.png\"]

                 {:all retina :red retina

                  :green retina :blue retina})"))])

     (box

      0.2 0.2 0.2

      :name "worm-segment"

      :position (Vector3f. 0 0 0)

      :color ColorRGBA/Orange)]))

 

 

 

 (defn test-worm-vision 

   "Testing vision:

    You should see the worm suspended in mid-air, looking down at a

    table. There are four small displays, one each for red, green blue,

    and gray channels. You can fire balls of various colors, and the

    four channels should react accordingly.

 

    Keys:

      r  : fire red-ball

      b  : fire blue-ball

      g  : fire green-ball

      <space> : fire white ball"

   

   ([] (test-worm-vision false))

   ([record?] 

      (let [the-worm (doto (worm)(body!))

            vision (vision! the-worm)

            vision-display (view-vision)

            fix-display (gen-fix-display)

            me (sphere 0.5 :color ColorRGBA/Blue :physical? false)

            x-axis

            (box 1 0.01 0.01 :physical? false :color ColorRGBA/Red

                 :position (Vector3f. 0 -5 0))

            y-axis

            (box 0.01 1 0.01 :physical? false :color ColorRGBA/Green

                 :position (Vector3f. 0 -5 0))

            z-axis

            (box 0.01 0.01 1 :physical? false :color ColorRGBA/Blue

                 :position (Vector3f. 0 -5 0))

 

            ]

 

        (world

         (nodify [(floor) the-worm x-axis y-axis z-axis me])

         (merge standard-debug-controls

                {"key-r" (colored-cannon-ball ColorRGBA/Red)

                 "key-b" (colored-cannon-ball ColorRGBA/Blue)

                 "key-g" (colored-cannon-ball ColorRGBA/Green)})

         

         (fn [world]

           (light-up-everything world)

           (speed-up world)

           (let [timer (IsoTimer. 60)]

                 (.setTimer world timer)

                 (display-dilated-time world timer))

           ;; add a view from the worm's perspective

           (if record?

             (Capture/captureVideo

              world

              (File.

               "/home/r/proj/cortex/render/worm-vision/main-view")))

             

           (add-camera!

            world

            (add-eye! the-worm (first (eyes the-worm)))

            (comp

             (view-image

              (if record?

                (File.

                 "/home/r/proj/cortex/render/worm-vision/worm-view")))

             BufferedImage!))

             

           (set-gravity world Vector3f/ZERO)

           (add-camera! world (.getCamera world) no-op))

         

         (fn [world _]

           (.setLocalTranslation me (.getLocation (.getCamera world)))

            (vision-display

             (map #(% world) vision)

             (if record?

               (File. "/home/r/proj/cortex/render/worm-vision")))

           (fix-display world)

           )))))

 #+end_src

 

 #+RESULTS: test-2

 : #'cortex.test.vision/test-worm-vision

 

 

 The world consists of the worm and a flat gray floor. I can shoot red,

 green, blue and white cannonballs at the worm. The worm is initially

 looking down at the floor, and there is no gravity. My perspective

 (the Main View), the worm's perspective (Worm View) and the 4 sensor

 channels that comprise the worm's eye are all saved frame-by-frame to

 disk.

 

 * Demonstration of Vision

 #+begin_html

 <div class="figure">

 <video controls="controls" width="755">

   <source src="../video/worm-vision.ogg" type="video/ogg"

 	  preload="none" poster="../images/aurellem-1280x480.png" />

 </video>

 <br> <a href="http://youtu.be/J3H3iB_2NPQ"> YouTube </a>

 <p>Simulated Vision in a Virtual Environment</p>

 </div>

 #+end_html

 

 ** Generate the Worm Video from Frames

 #+name: magick2

 #+begin_src clojure

 (ns cortex.video.magick2

   (:import java.io.File)

   (:use clojure.java.shell))

 

 (defn images [path]

   (sort (rest (file-seq (File. path)))))

 

 (def base "/home/r/proj/cortex/render/worm-vision/")

 

 (defn pics [file]

   (images (str base file)))

 

 (defn combine-images []

   (let [main-view (pics "main-view")

         worm-view (pics "worm-view")

         blue   (pics "0")

         green  (pics "1")

         red    (pics "2")

         gray   (pics "3")

         blender (let [b-pics (pics "blender")]

                   (concat b-pics (repeat 9001 (last b-pics))))

         background (repeat 9001 (File. (str base "background.png")))

         targets (map

                  #(File. (str base "out/" (format "%07d.png" %)))

                  (range 0 (count main-view)))]

     (dorun

      (pmap

       (comp

        (fn [[background main-view worm-view red green blue gray blender target]]

          (println target)

          (sh "convert"

              background

              main-view "-geometry" "+18+17"    "-composite"

              worm-view "-geometry" "+677+17"   "-composite"

              green     "-geometry" "+685+430"  "-composite"

              red       "-geometry" "+788+430"  "-composite"

              blue      "-geometry" "+894+430"  "-composite"

              gray      "-geometry" "+1000+430" "-composite"

              blender   "-geometry" "+0+0"      "-composite"

              target))

        (fn [& args] (map #(.getCanonicalPath %) args)))

       background main-view worm-view red green blue gray blender targets))))

 #+end_src

 

 #+begin_src sh :results silent

 cd /home/r/proj/cortex/render/worm-vision

 ffmpeg -r 25 -b 9001k -i out/%07d.png -vcodec libtheora worm-vision.ogg 

 #+end_src

    

 * Onward!

   - As a neat bonus, this idea behind simulated vision also enables one

     to [[../../cortex/html/capture-video.html][capture live video feeds from jMonkeyEngine]].

   - Now that we have vision, it's time to tackle [[./hearing.org][hearing]].

 #+appendix

 

 * Headers

 

 #+name: vision-header

 #+begin_src clojure 

 (ns cortex.vision

   "Simulate the sense of vision in jMonkeyEngine3. Enables multiple

   eyes from different positions to observe the same world, and pass

   the observed data to any arbitrary function. Automatically reads

   eye-nodes from specially prepared blender files and instantiates

   them in the world as actual eyes."

   {:author "Robert McIntyre"}

   (:use (cortex world sense util))

   (:import com.jme3.post.SceneProcessor)

   (:import (com.jme3.util BufferUtils Screenshots))

   (:import java.nio.ByteBuffer)

   (:import java.awt.image.BufferedImage)

   (:import (com.jme3.renderer ViewPort Camera))

   (:import (com.jme3.math ColorRGBA Vector3f Matrix3f))

   (:import com.jme3.renderer.Renderer)

   (:import com.jme3.app.Application)

   (:import com.jme3.texture.FrameBuffer)

   (:import (com.jme3.scene Node Spatial)))

 #+end_src

 

 #+name: test-header

 #+begin_src clojure

 (ns cortex.test.vision

   (:use (cortex world sense util body vision))

   (:use cortex.test.body)

   (:import java.awt.image.BufferedImage)

   (:import javax.swing.JPanel)

   (:import javax.swing.SwingUtilities)

   (:import java.awt.Dimension)

   (:import javax.swing.JFrame)

   (:import com.jme3.math.ColorRGBA)

   (:import com.jme3.scene.Node)

   (:import com.jme3.math.Vector3f)

   (:import java.io.File)

   (:import (com.aurellem.capture Capture RatchetTimer IsoTimer)))

 #+end_src

 

 #+results: test-header

 : com.aurellem.capture.IsoTimer

 

 * Source Listing

   - [[../src/cortex/vision.clj][cortex.vision]]

   - [[../src/cortex/test/vision.clj][cortex.test.vision]]

   - [[../src/cortex/video/magick2.clj][cortex.video.magick2]]

   - [[../assets/Models/subtitles/worm-vision-subtitles.blend][worm-vision-subtitles.blend]]

 #+html: <ul> <li> <a href="../org/sense.org">This org file</a> </li> </ul>

   - [[http://hg.bortreb.com ][source-repository]]

  

 

 * Next 

 I find some [[./hearing.org][ears]] for the creature while exploring the guts of

 jMonkeyEngine's sound system.

 

 * COMMENT Generate Source

 #+begin_src clojure :tangle ../src/cortex/vision.clj

 <<vision-header>>

 <<pipeline-1>>

 <<pipeline-2>>

 <<retina>>

 <<add-eye>>

 <<sensitivity>>

 <<eye-node>>

 <<add-camera>>

 <<kernel>>

 <<main>>

 <<display>>

 #+end_src

 

 #+begin_src clojure :tangle ../src/cortex/test/vision.clj

 <<test-header>>

 <<test-1>>

 <<test-2>>

 #+end_src

 

 #+begin_src clojure :tangle ../src/cortex/video/magick2.clj

 <<magick2>>

 #+end_src