view thesis/rlm-cortex-meng.tex @ 451:0a4362d1f138

finishing up chapter 3.
author Robert McIntyre <rlm@mit.edu>
date Wed, 26 Mar 2014 20:38:17 -0400
parents 09b7c8dd4365
children f339e3d5cc8c
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1 % -*- Mode:TeX -*-
3 %% IMPORTANT: The official thesis specifications are available at:
4 %% http://libraries.mit.edu/archives/thesis-specs/
5 %%
6 %% Please verify your thesis' formatting and copyright
7 %% assignment before submission. If you notice any
8 %% discrepancies between these templates and the
9 %% MIT Libraries' specs, please let us know
10 %% by e-mailing thesis@mit.edu
12 %% The documentclass options along with the pagestyle can be used to generate
13 %% a technical report, a draft copy, or a regular thesis. You may need to
14 %% re-specify the pagestyle after you \include cover.tex. For more
15 %% information, see the first few lines of mitthesis.cls.
17 %\documentclass[12pt,vi,twoside]{mitthesis}
18 %%
19 %% If you want your thesis copyright to you instead of MIT, use the
20 %% ``vi'' option, as above.
21 %%
22 %\documentclass[12pt,twoside,leftblank]{mitthesis}
23 %%
24 %% If you want blank pages before new chapters to be labelled ``This
25 %% Page Intentionally Left Blank'', use the ``leftblank'' option, as
26 %% above.
28 \documentclass[12pt,twoside,singlespace,vi]{mitthesis}
29 %\documentclass[12pt,twoside,vi]{mitthesis}
30 \usepackage[utf8]{inputenc}
31 \usepackage[T1]{fontenc}
32 \usepackage{fixltx2e}
33 \usepackage{graphicx}
34 \usepackage{longtable}
35 \usepackage{float}
36 \usepackage{wrapfig}
37 \usepackage{rotating}
38 \usepackage[normalem]{ulem}
39 \usepackage{amsmath}
40 \usepackage{textcomp}
41 \usepackage{marvosym}
42 \usepackage{wasysym}
43 \usepackage{amssymb}
44 \usepackage{hyperref}
45 \usepackage{libertine}
46 \usepackage{inconsolata}
47 \usepackage{rotating}
49 \usepackage[backend=bibtex,style=alphabetic]{biblatex}
50 \addbibresource{cortex.bib}
52 \usepackage{xcolor}
53 \definecolor{dark-red}{rgb}{0.4,0.15,0.15}
54 \definecolor{dark-blue}{rgb}{0.15,0.4,0.15}
55 \definecolor{medium-blue}{rgb}{0,0,0.5}
56 \hypersetup{
57 colorlinks, linkcolor={dark-red},
58 citecolor={dark-blue}, urlcolor={medium-blue}
59 }
61 \renewcommand{\thesection}{\arabic{section}}
62 \renewcommand{\thefigure}{\arabic{figure}}
64 %%%%% better source code display
65 \usepackage{minted}
67 %% dyl fonts
69 % \usemintedstyle{friendly}
70 % \usemintedstyle{perldoc}
71 %\definecolor{bg}{rgb}{0.95,0.95,0.95}
72 \definecolor{bg}{rgb}{0.625,0,0}
73 \usemintedstyle{default}
74 \newcommand{\why}[1]{\\ \par{\footnotesize #1}}
75 %\setmonofont[Scale=0.9,BoldFont={Inconsolata Bold}]{Inconsolata}
77 %\usepackage[gray]{xcolor}
78 \newminted{clojure}{fontsize=\footnotesize}
79 %\newminted{clojure}{fontsize=\footnotesize,bgcolor=bg}
80 %\newminted{clojure}{fontsize=\scriptsize}
82 %\usepackage{lgrind}
83 \pagestyle{plain}
85 \begin{document}
87 \include{cover}
88 % Some departments (e.g. 5) require an additional signature page. See
89 % signature.tex for more information and uncomment the following line if
90 % applicable.
91 % \include{signature}
92 \pagestyle{plain}
93 \tableofcontents
94 %\newpage
95 %\listoffigures
96 %\newpage
97 %\listoftables
98 \include{cortex}
99 \nocite{*}
100 %\include{chap2}
101 \appendix
102 \begin{singlespace}
103 %\bibliographystyle{agsm}
104 %\bibliographystyle{apa}
105 %\bibliographystyle{plainnat}
106 \include{user-guide}
107 \printbibliography
108 \end{singlespace}
109 \end{document}