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annotate thesis/rlm-cortex-meng.tex @ 474:57c7d5aec8d5

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mix in touch; need to clean it up.
author Robert McIntyre <rlm@mit.edu>
date Fri, 28 Mar 2014 21:05:12 -0400
parents e4104ce9105c
children 5a15611fbb9f
rev   line source
rlm@428 1 % -*- Mode:TeX -*-
rlm@427 2
rlm@428 3 %% IMPORTANT: The official thesis specifications are available at:
rlm@428 4 %% http://libraries.mit.edu/archives/thesis-specs/
rlm@428 5 %%
rlm@428 6 %% Please verify your thesis' formatting and copyright
rlm@428 7 %% assignment before submission. If you notice any
rlm@428 8 %% discrepancies between these templates and the
rlm@428 9 %% MIT Libraries' specs, please let us know
rlm@428 10 %% by e-mailing thesis@mit.edu
rlm@427 11
rlm@428 12 %% The documentclass options along with the pagestyle can be used to generate
rlm@428 13 %% a technical report, a draft copy, or a regular thesis. You may need to
rlm@428 14 %% re-specify the pagestyle after you \include cover.tex. For more
rlm@428 15 %% information, see the first few lines of mitthesis.cls.
rlm@427 16
rlm@428 17 %\documentclass[12pt,vi,twoside]{mitthesis}
rlm@428 18 %%
rlm@428 19 %% If you want your thesis copyright to you instead of MIT, use the
rlm@428 20 %% ``vi'' option, as above.
rlm@428 21 %%
rlm@428 22 %\documentclass[12pt,twoside,leftblank]{mitthesis}
rlm@428 23 %%
rlm@428 24 %% If you want blank pages before new chapters to be labelled ``This
rlm@428 25 %% Page Intentionally Left Blank'', use the ``leftblank'' option, as
rlm@428 26 %% above.
rlm@427 27
rlm@441 28 \documentclass[12pt,twoside,singlespace,vi]{mitthesis}
rlm@451 29 %\documentclass[12pt,twoside,vi]{mitthesis}
rlm@428 30 \usepackage[utf8]{inputenc}
rlm@428 31 \usepackage[T1]{fontenc}
rlm@428 32 \usepackage{fixltx2e}
rlm@428 33 \usepackage{graphicx}
rlm@428 34 \usepackage{longtable}
rlm@428 35 \usepackage{float}
rlm@428 36 \usepackage{wrapfig}
rlm@428 37 \usepackage{rotating}
rlm@428 38 \usepackage[normalem]{ulem}
rlm@428 39 \usepackage{amsmath}
rlm@428 40 \usepackage{textcomp}
rlm@428 41 \usepackage{marvosym}
rlm@428 42 \usepackage{wasysym}
rlm@428 43 \usepackage{amssymb}
rlm@428 44 \usepackage{hyperref}
rlm@429 45 \usepackage{libertine}
rlm@429 46 \usepackage{inconsolata}
rlm@449 47 \usepackage{rotating}
rlm@452 48 \usepackage{caption}
rlm@452 49
rlm@465 50 \usepackage{afterpage}
rlm@452 51
rlm@465 52 \afterpage{\clearpage} %
rlm@429 53
rlm@431 54 \usepackage[backend=bibtex,style=alphabetic]{biblatex}
rlm@431 55 \addbibresource{cortex.bib}
rlm@431 56
rlm@431 57 \usepackage{xcolor}
rlm@431 58 \definecolor{dark-red}{rgb}{0.4,0.15,0.15}
rlm@431 59 \definecolor{dark-blue}{rgb}{0.15,0.4,0.15}
rlm@431 60 \definecolor{medium-blue}{rgb}{0,0,0.5}
rlm@431 61 \hypersetup{
rlm@431 62 colorlinks, linkcolor={dark-red},
rlm@431 63 citecolor={dark-blue}, urlcolor={medium-blue}
rlm@431 64 }
rlm@431 65
rlm@452 66
rlm@429 67 \renewcommand{\thesection}{\arabic{section}}
rlm@445 68 \renewcommand{\thefigure}{\arabic{figure}}
rlm@427 69
rlm@428 70 %%%%% better source code display
rlm@428 71 \usepackage{minted}
rlm@427 72
rlm@429 73 %% dyl fonts
rlm@429 74
rlm@428 75 % \usemintedstyle{friendly}
rlm@428 76 % \usemintedstyle{perldoc}
rlm@428 77 %\definecolor{bg}{rgb}{0.95,0.95,0.95}
rlm@429 78 \definecolor{bg}{rgb}{0.625,0,0}
rlm@428 79 \usemintedstyle{default}
rlm@429 80 \newcommand{\why}[1]{\\ \par{\footnotesize #1}}
rlm@429 81 %\setmonofont[Scale=0.9,BoldFont={Inconsolata Bold}]{Inconsolata}
rlm@427 82
rlm@429 83 %\usepackage[gray]{xcolor}
rlm@429 84 \newminted{clojure}{fontsize=\footnotesize}
rlm@429 85 %\newminted{clojure}{fontsize=\footnotesize,bgcolor=bg}
rlm@429 86 %\newminted{clojure}{fontsize=\scriptsize}
rlm@427 87
rlm@428 88 %\usepackage{lgrind}
rlm@428 89 \pagestyle{plain}
rlm@427 90
rlm@452 91
rlm@465 92 % Alter some LaTeX defaults for better treatment of figures:
rlm@465 93 % See p.105 of "TeX Unbound" for suggested values.
rlm@465 94 % See pp. 199-200 of Lamport's "LaTeX" book for details.
rlm@465 95 % General parameters, for ALL pages:
rlm@465 96 \renewcommand{\topfraction}{0.9} % max fraction of floats at top
rlm@465 97 \renewcommand{\bottomfraction}{0.8} % max fraction of floats at bottom
rlm@465 98 % Parameters for TEXT pages (not float pages):
rlm@465 99 \setcounter{topnumber}{2}
rlm@465 100 \setcounter{bottomnumber}{2}
rlm@465 101 \setcounter{totalnumber}{4} % 2 may work better
rlm@465 102 \setcounter{dbltopnumber}{2} % for 2-column pages
rlm@465 103 \renewcommand{\dbltopfraction}{0.9} % fit big float above 2-col. text
rlm@465 104 \renewcommand{\textfraction}{0.07} % allow minimal text w. figs
rlm@465 105 % Parameters for FLOAT pages (not text pages):
rlm@465 106 \renewcommand{\floatpagefraction}{0.7} % require fuller float pages
rlm@465 107 % N.B.: floatpagefraction MUST be less than topfraction !!
rlm@465 108 \renewcommand{\dblfloatpagefraction}{0.7} % require fuller float pages
rlm@465 109 % remember to use [htp] or [htpb] for placement
rlm@452 110
rlm@452 111
rlm@428 112 \begin{document}
rlm@427 113
rlm@428 114 \include{cover}
rlm@428 115 % Some departments (e.g. 5) require an additional signature page. See
rlm@428 116 % signature.tex for more information and uncomment the following line if
rlm@428 117 % applicable.
rlm@428 118 % \include{signature}
rlm@428 119 \pagestyle{plain}
rlm@429 120 \tableofcontents
rlm@429 121 %\newpage
rlm@429 122 %\listoffigures
rlm@429 123 %\newpage
rlm@429 124 %\listoftables
rlm@428 125 \include{cortex}
rlm@429 126 \nocite{*}
rlm@428 127 %\include{chap2}
rlm@428 128 \appendix
rlm@428 129 \begin{singlespace}
rlm@429 130 %\bibliographystyle{agsm}
rlm@429 131 %\bibliographystyle{apa}
rlm@431 132 %\bibliographystyle{plainnat}
rlm@437 133 \include{user-guide}
rlm@431 134 \printbibliography
rlm@428 135 \end{singlespace}
rlm@428 136 \end{document}
rlm@427 137